本期是呼吸作用章節(jié)的最后一期，內(nèi)容為 細(xì)胞呼吸的調(diào)控。如果有不太明白的或者有錯誤的地方隨時來找UP主喔~ 文集本部分的參考文獻(xiàn) Essential Cell Biology, 5th ed. Alberts, et al. 2019. 部分內(nèi)容來自 khanacademy 與維基百科。本章的內(nèi)容很大程度上參考了 khanacademy.

13j Regulation of Cellular Respiration?

Regulation

You may have too much of a good thing. Cells face a problem when they break down fuels, such as glucose, to produce ATP. If the cell’s supply of ATP is low, it would do well to break down glucose as quickly as possible, replenishing the ATP it needs to “keep the lights on.” If the supply of ATP is high, on the other hand, it might not be such a good idea to oxidize glucose at top speed. ATP is an unstable molecule, and if it sits around in the cell too long, it’s likely to spontaneously hydrolyze back to ADP. So in this case, the cell has spent glucose to make ATP, and that ATP ends up going to waste.

It’s important for a cell to carefully match the activity of its fuel breakdown pathways to its energy needs at a given moment. Here, we'll see how cells turn cellular respiration pathways “up” or “down” in response to ATP levels and other metabolic signals.

We have been talking about regulations in some sections before. This lecture gives a summary and presents some new regulation pathways.

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Pathway Control

In many cases, pathways are regulated through enzymes that catalyze individual steps of the pathway. If the enzyme for a particular step is active, that step can take place quickly, but if the enzyme is inactive, the step will happen slowly or not at all. Thus, if a cell wants to control the activity of a metabolic pathway, it needs to regulate the activity of one or more of the enzymes in that pathway.

The primary target for regulation of a biochemical pathway is often the enzyme that catalyzes the pathway’s first committed step (that is, the first step that is not readily reversible).

How are the enzymes that control metabolic pathways regulated? A number of cellular respiration enzymes are controlled by the binding of regulatory molecules at one or more regulatory allosteric sites.?Binding of a regulator to the allosteric site of an enzyme changes its structure, making it more or less active.

The molecules that bind cellular respiration enzymes act as signals, giving the enzyme information about the cell's energy state. ATP, ADP, and NADH are examples of molecules that regulate cellular respiration enzymes. ATP, for instance, is a "stop" signal: high levels mean that the cell has enough ATP and does not need to make more through cellular respiration. This is a case of feedback inhibition, in which a product "feeds back" to shut down its pathway.

Regulation of Glycolysis

Several steps in glycolysis are regulated, but the most important control point is the third step of the pathway, which is catalyzed by an enzyme called Phosphofructokinase (PFK). This reaction is the first committed step, making PFK a central target for regulation of the glycolysis pathway as a whole.

PFK is regulated by ATP, AMP, and citrate, as well as some other molecules:

- ATP is a negative regulator of PFK, which makes sense: if there is already plenty of ATP in the cell, glycolysis does not need to make more.

- AMP is a positive regulator of PFK. When a cell is very low on ATP, it will start squeezing more ATP out of ADP molecules by converting them to ATP and AMP.

ADP + ADP → ATP + AMP

High levels of AMP mean that the cell is starved for energy,?so that glycolysis must run quickly to replenish ATP.

- Citrate, the first product of the citric acid cycle, can also inhibit PFK. If citrate builds up, this is a sign that glycolysis can slow down, because the citric acid cycle is backed up and doesn’t need more fuel.

Regulation of Pyruvate Oxidation

The next key control point comes after glycolysis, when pyruvate is converted to acetyl CoA. This conversion step is irreversible in many organisms and controls how much acetyl CoA “fuel” enters the citric acid cycle. The enzyme that catalyzes this conversion reaction is called Pyruvate Dehydrogenase Complex (PDC).

ATP and NADH make this enzyme less active, while ADP makes it more active.?Therefore,?more acetyl CoA is made when energy stores?(ATP / NADH)?are low.

Pyruvate dehydrogenase is also activated by its substrate, pyruvate, and inhibited by its product, acetyl CoA. This ensures that acetyl CoA is made only when it’s needed?(not a lot of acetyl CoA?available)?and when there's plenty of pyruvate available.

In eukaryotes, PDC?regulates pyruvate metabolism, and ensures homeostasis of glucose during absorptive and post-absorptive state metabolism.

Regulation of Citric Acid Cycle

Entry into the citric acid cycle is largely controlled through pyruvate dehydrogenase (above), the enzyme that produces acetyl CoA. However, there are two additional steps in the cycle that are subject to regulation. These are the two steps in which carbon dioxide molecules are released, and also the steps at which the first two NADH molecules of the cycle are produced.

(1) Isocitrate dehydrogenase (IDH) controls the first of these two steps?at step 3?of the TCA cycle, turning a six-carbon molecule into a five-carbon molecule. This enzyme is allosterically inhibited by ATP and NADH, but activated by ADP.

(2) α-Ketoglutarate dehydrogenase (OGDC) controls the second of these two steps, turning the five-carbon compound from the previous step into a four-carbon compound bound to CoA (succinyl CoA). This enzyme is inhibited by ATP, NADH, and several other molecules, including succinyl CoA itself.

Putting Together

There are lots of other regulatory mechanisms for cellular respiration besides the ones we've discussed above. For instance, the speed of the electron transport chain is regulated by levels of ADP and ATP, and many other enzymes are subject to regulation.?At each stage, we can see similar elements. For instance, we see feedback inhibition at many stages, at the level of pathways and of individual reactions.?Monitoring of the cell's energy state through levels of molecules like ATP, ADP, AMP, and NADH is another common feature.?

The diagram below summarizes the key enzymes we’ve discussed, along with some of their most important regulators.

本次內(nèi)容到此結(jié)束，感謝閱讀！下一期內(nèi)容將開始新的章節(jié)：光合作用。

作者：離久-張所長